PPDB

The Plant Proteome Database

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ATMG01120.1   NADH dehydrogenase 1B

Lab Annot. NADH dehydrogenase 1B
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear
Curated Location mitochondria

TAIR curated location: mitochondrion & mitochondrial membrane & NADH dehydrogenase complex (ubiquinone)16407270
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
ATCG01100.1 11Arabidopsis thaliana6E-16964566412 (393)_
Osp1g00960.1 7Oryza sativa3E-1595456491 (91)_
Os10g21396.1 7Oryza sativa3E-1595456428 (28)_
Os01g33960.1 7Oryza sativa4E-093187900 (0)_
YP_588282.1 agpv5Zea mays2E-549196960 (0)S
YP_588310.1 agpv5Zea mays2E-549196960 (0)S
v1_YP_588310 4a53Zea mays2E-549196960 (0) 
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NADHdh(1)
TargetP: Secreted (Class 2 C0.021; M0.181; S0.785; _0.094)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon:
TAT position:
Length 91 aa (-cTP 13)
Molecular Weight 9.97 kDA(-cTP )
PI 4.90(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
20197505(mitochondria Complex I (leaf))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help