PPDB

The Plant Proteome Database

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ATMG00513.1   NADH dehydrogenase 5A

Lab Annot. Mitochondrial NADH dehydrogenase subunit 5. NAD5a, NAD5b and NAD5c.
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear
Curated Location mitochondria

TAIR curated location: mitochondrion14671022,1915303
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
ATCG01010.1 11Arabidopsis thaliana5E-834054257115 (110)S
ATMG00670.1 11Arabidopsis thaliana2E-086256640 (0)S
ATMG00580.1 11Arabidopsis thaliana2E-0629823400 (0)S
Os10g21418.1 7Oryza sativa5E-95399455914 (14)S
Osp1g00880.1 7Oryza sativa2E-94399455939 (39)S
Os12g14939.1 7Oryza sativa5E-082696960 (0)S
Zm00001eb442540_P001 agpv5Zea mays039394940 (0)S
YP_588334.1 agpv5Zea mays048294950 (0)S
v1_YP_588334 4a53Zea mays0482949531 (31) 
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Proton_antipo_M(2) Proton_antipo_N(1)
TargetP: Secreted (Class 3 C0.008; M0.096; S0.674; _0.201)
Predotar:
Subcel. Location:
TM-HMM prediction: 13 TMs
Aramemnon:
TAT position:
Length 482 aa (-cTP 459)
Molecular Weight 52.46 kDA(-cTP )
PI 7.58(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
337Detail       bundle sheaths [A. thaliana]Bundle sheath total BS strands wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19525416(leaf (wt and clpr4-1 mutant))
20197505(mitochondria Complex I (leaf))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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