PPDB

The Plant Proteome Database

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ATMG00280.1   Ribulose bisphosphate carboxylase large chain%2C catalytic domain-containing protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G07732.1 11Arabidopsis thaliana8E-74106969613 (6)M
ATCG00490.1 11Arabidopsis thaliana1E-569491935202 (3853)_
Osp1g00420.1 7Oryza sativa4E-55948992259 (259)_
Os10g21268.1 7Oryza sativa2E-5494889220 (20)_
Os12g10580.1 7Oryza sativa5E-3772808845 (45)_
Zm00001eb438360_P001 agpv5Zea mays4E-5794909220 (20)_
plastid_NP_043033.1 agpv5Zea mays2E-5594909216 (16)_
v1_NP_043033 4a53Zea mays2E-55949092675 (674) 
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RuBisCO_large(1)
TargetP: Mitochondria (Class 4 C0.026; M0.691; S0.059; _0.348)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 110 aa (-cTP 107)
Molecular Weight 12.66 kDA(-cTP )
PI 9.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
272Detail       leaf [A. thaliana] chloroplast stromaclpr2-1
2083Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2087Detail       Total leaf [A. thaliana] total soluble wild-type
2264Detail       leaf [A. thaliana] stroma Clp stromawild-type
2265Detail       leaf [A. thaliana] stroma Clp stromaClp C1 trap

* For details about the exprimental sources click here.

Published Proteomics Data

18814325(cotyledons)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help