PPDB

The Plant Proteome Database

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ATMG00060.1   NADH dehydrogenase subunit 5C

Lab Annot. Mitochondrial NADH dehydrogenase subunit 5..
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear
Curated Location mitochondria

TAIR curated location: mitochondrion1915303
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes


Prediction
PFAM: ABG_transport(1) C4dic_mal_tran(1) CemA(1) MFS_1(1) NADH5_C(1) Oxidored_q1(1) Ox
TargetP: Mitochondria (Class 5 C0.017; M0.365; S0.044; _0.319)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon:
TAT position:
Length 178 aa (-cTP 113)
Molecular Weight 19.35 kDA(-cTP )
PI 9.29(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
337Detail       bundle sheaths [A. thaliana]Bundle sheath total BS strands wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20197505(mitochondria Complex I (leaf))
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21988472(vacuole (unfiltered data))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help