PPDB

The Plant Proteome Database

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ATCG01050.1   NADH-plastoquinone oxidoreductase subunit

Lab Annot. NDH (NDH-4)
Mapman: 1.1.6 PS.lightreaction.NADH DH
Curated Location thylakoid (Pubmed: 23198870 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
ATMG00580.1 11Arabidopsis thaliana5E-6150229520 (0)S
AT2G07633.1 11Arabidopsis thaliana1E-146355690 (0)_
ATCG01010.1 11Arabidopsis thaliana1E-083072345110 (110)S
Os07g22504.1 7Oryza sativa049878895 (5)S
Os06g46435.1 7Oryza sativa049779905 (5)S
Osp1g00910.1 7Oryza sativa0497799017 (17)S
GRMZM5G800096_P01 3.21Zea mays0500788987 (87)S
v1_NP_043087 4a53Zea mays04957889101 (101) 
NP_043087.1 agpv5Zea mays049578890 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Proton_antipo_M(2)
TargetP: Secreted (Class 3 C0.005; M0.013; S0.943; _0.432)
Predotar:
Subcel. Location:
TM-HMM prediction: 14 TMs
Aramemnon:
TAT position:
Length 506 aa (-cTP 473)
Molecular Weight 56.92 kDA(-cTP )
PI 8.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1331Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1744Detail        [A. thaliana] Mep-6
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19995723(chloroplast reference proteome)

Comparative Proteomics Data


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