PPDB

 The Plant Proteome Database

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ATCG00760.1   ribosomal protein L36
Lab Annot. 50S ribosomal protein L36
Mapman: 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit
Curated Location plastid ribosome (Pubmed: 23198870 )

TAIR curated location: plastid large ribosomal subunit
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20180.1 11Arabidopsis thaliana2E-123865890 (0)_
AT5G20180.2 11Arabidopsis thaliana2E-123865890 (0)_
AT5G20180.4 11Arabidopsis thaliana2E-123865890 (0)_
Osp1g00680.1 7Oryza sativa3E-083791940 (0)M
Os03g59720.1 7Oryza sativa9E-083850810 (0)M
NP_043057.1 agpv5Zea mays3E-083791940 (0)M
v1_NP_043057 4a53Zea mays3E-083791940 (0) 
Zm00001eb103590_P001 agpv5Zea mays1E-073847810 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_L36(1)
TargetP: Mitochondria (Class 5 C0.130; M0.517; S0.074; _0.326)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 37 aa (-cTP 33)
Molecular Weight 4.46 kDA(-cTP )
PI 11.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
339Detail       leaf [A. thaliana] chloroplast stromawild-type
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1196Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1197Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1495Detail       leaf [A. thaliana] wild-type
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data
Expr*SourceTech.SpotPepSeqChargeState(z)AreaRatioAmbiguityTissueSample from
180_181clpr2-1 cICAT - exp1 / wt cICAT - exp1cICAT12IIVICSNPR + ICAT_l / IIVICSNPR + ICAT_h210.37 leaf [A. thaliana] chloroplast stroma

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