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ATCG00750.1 ribosomal protein S11

Lab Annot.

30S ribosomal protein S11 (uS11C)
Mapman: 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit

Curated Location

plastid ribosome

TAIR curated location: plastid small ribosomal subunit

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G52580.1 11 Arabidopsis thaliana 2E-12 110 35 53 135 (77) _
AT3G11510.1 11 Arabidopsis thaliana 2E-12 110 34 53 289 (177) _
AT2G36160.1 11 Arabidopsis thaliana 2E-12 110 34 53 279 (168) _
Os05g22712.1 7 Oryza sativa 8E-59 133 67 81 0 (0) C
Osp1g00670.1 7 Oryza sativa 1E-58 133 67 81 0 (0) M
Os10g21332.1 7 Oryza sativa 1E-58 133 67 81 0 (0) M
plastid_NP_043056.1 agpv5 Zea mays 1E-58 133 66 81 0 (0) C
GRMZM5G858556_P01 3.21 Zea mays 1E-58 133 66 81 70 (69) C
v1_GRMZM2G427564_P01 4a53 Zea mays 1E-58 133 66 81 12 (12) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ribosomal_S11(1)
TargetP:	Chloroplast (Class 4 C0.566; M0.320; S0.009; _0.143)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	138 aa (-cTP 57)
Molecular Weight	15.02 kDA(-cTP 6.30)
PI	12.25(-cTP 11.83)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
272	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
310	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-TAPlong
311	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-his6
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
339	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
355	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
356	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
412	Detail								leaf [A. thaliana]	stroma - R-X102 tag-CNPAGE	clpr2-1-TapTagR2
420	Detail								leaf [A. thaliana]	chloroplast stroma	clpR1-stop (EMS)
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
541	Detail								leaf [A. thaliana]	stroma (FPLC) >1 MDa stroma	wild-type
542	Detail								leaf [A. thaliana]	stroma (FPLC) >500 kDa (HMB)	wild-type
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type
618	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
641	Detail								[A. thaliana]	plastid nucleoid (crude)	wild-type
869	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
870	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
872	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (1-8); k2k3 (9-10)
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1091	Detail								[A. thaliana]		R4Strep Complemented
1175	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1179	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1
1196	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1197	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1
1199	Detail								leaf [A. thaliana]	co-IP OEC23 stroma	clpr2-1
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1209	Detail								leaf [A. thaliana]	total leaf tissue	StrepII-tagged Clp transgenic
1213	Detail								leaf [A. thaliana]	total leaf tissue	P3-StrepII complemented
1214	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1215	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	wild-type
1292	Detail								leaf [A. thaliana]	co-IP cGEP (rep. 1) stroma	wild-type
1293	Detail								leaf [A. thaliana]	co-IP preserum cGEP (rep. 2) stroma	wild-type
1294	Detail								leaf [A. thaliana]	co-IP cGEP (rep. 2) stroma	wild-type
1331	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1332	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	shoot1
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1393	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1413	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR1	wild-type
1414	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR2	wild-type
1415	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.1	clpr2-1
1416	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.2	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1507	Detail								[A. thaliana]		wild-type
1508	Detail								[A. thaliana]
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1526	Detail								leaf [A. thaliana]	co-IP GST-ClpS 100ug bait stroma	clpc1 x clps (rep. 2)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1535	Detail								leaf [A. thaliana]		wild-type
1538	Detail								leaf [A. thaliana]	plastid RNCs thylakoid membrane	wild-type
1539	Detail								leaf [A. thaliana]		wild-type
1547	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1596	Detail								[A. thaliana]
1625	Detail								Rosettes [A. thaliana]		Wild-type
1626	Detail								Rosettes [A. thaliana]		k1xk3
1634	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
1635	Detail								leaf [A. thaliana]	Stroma stroma	clpt1-2
1636	Detail								leaf [A. thaliana]	Stroma stroma	clpt1-2
1637	Detail								leaf [A. thaliana]	total leaf tissue stroma	Wild-type
1638	Detail								leaf [A. thaliana]	total leaf tissue stroma	Wild-type
1639	Detail								leaf [A. thaliana]	total leaf tissue stroma	clpt2-1
1640	Detail								leaf [A. thaliana]	total leaf tissue stroma	clpt2-1
1670	Detail								[A. thaliana]
1672	Detail								[A. thaliana]
1690	Detail								[A. thaliana]
1693	Detail								[A. thaliana]		uvr
1719	Detail								[A. thaliana]
1744	Detail								[A. thaliana]		Mep-6
1749	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1756	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1757	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
1870	Detail								Total leaf [A. thaliana]	Stroma	wild-type
1871	Detail								Total leaf [A. thaliana]	Stroma	wild-type
1872	Detail								Total leaf [A. thaliana]	Stroma	wild-type
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
1930	Detail								leaf [A. thaliana]	total leaf tissue	Col_0 Wild-type
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1933	Detail								leaf [A. thaliana]	chloroplast	wild-type
1934	Detail								leaf [A. thaliana]	chloroplast	wild-type
1935	Detail								leaf [A. thaliana]	chloroplast	wild-type
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1937	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1938	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1948	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1983	Detail								leaf [A. thaliana]	plastid	wild-type
1984	Detail								leaf [A. thaliana]	plastid	wild-type
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1987	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1999	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2000	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2001	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2002	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2021	Detail								leaf [A. thaliana]	total leaf tissue
2112	Detail								leaf [A. thaliana]	Stroma stroma	wt
2113	Detail								leaf [A. thaliana]	Stroma stroma	wt
2120	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2121	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2123	Detail								leaf [A. thaliana]	Stroma stroma	Wild typre
2124	Detail								leaf [A. thaliana]	Stroma stroma	wild type
2125	Detail								leaf [A. thaliana]	Stroma stroma	wild type
2127	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2128	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2129	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
2130	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
2131	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2185	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2240	Detail								seedlings [A. thaliana]	total tissue	gfs9
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2263	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 trap
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
20423899(chloroplast)
19888209(80S polysomal fraction)
19423572(leaf (wt and clpr2-1))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21533090(plasmodesmata-crude)
21311031(chloroplasts)
21311031(mitochondria)

Comparative Proteomics Data