PPDB

The Plant Proteome Database

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ATCG00700.1   photosystem II reaction center protein N

Lab Annot. psbN
Mapman: 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits
Curated Location thylakoid-integral (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Osp1g00630.1 7Oryza sativa2E-244397970 (0)S
NP_043051.1 agpv5Zea mays2E-244397970 (0)S
v1_NP_043051 4a53Zea mays2E-244397970 (0) 

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PsbN(1)
TargetP: Secreted (Class 1 C0.011; M0.046; S0.971; _0.104)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 43 aa (-cTP 12)
Molecular Weight 4.72 kDA(-cTP )
PI 4.33(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


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