PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

ATCG00040.1   maturase K

Lab Annot. matK maturase
Mapman: 27.1.1 RNA.processing.splicing
Curated Location plastid stroma (Pubmed: 23198870 )

TAIR curated location: chloroplast
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g16734.1 7Oryza sativa5E-17452553680 (0)_
Os10g21194.1 7Oryza sativa5E-17352553670 (0)_
Osp1g00120.1 7Oryza sativa6E-17252553670 (0)_
GRMZM5G836994_P01 3.21Zea mays2E-169521536716 (16)S
NP_043005.2 agpv5Zea mays1E-16751253670 (0)_
v1_NP_043005 4a53Zea mays1E-167512536712 (12) 

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Intron_maturas2(1) MatK_N(1)
TargetP: Cytoplasm (Class 2 C0.040; M0.142; S0.086; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 526 aa (-cTP 521)
Molecular Weight 63.04 kDA(-cTP )
PI 9.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

20423899(chloroplast)
19995723(chloroplast reference proteome)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help