PPDB

PPDB	The Plant Proteome Database

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AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DNA helicase
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49830.1 11 Arabidopsis thaliana 0 473 82 91 0 (0) _
AT5G22330.1 11 Arabidopsis thaliana 1E-125 459 43 66 32 (13) _
Os06g08770.1 7 Oryza sativa 0 481 77 88 6 (6) _
Os07g39290.1 7 Oryza sativa 2E-141 370 58 70 0 (0) _
Os01g62040.1 7 Oryza sativa 9E-127 458 43 66 2 (2) _
Zm00001eb325580_P002 agpv5 Zea mays 0 482 77 88 0 (0) _
GRMZM2G058087_P01 3.21 Zea mays 0 482 77 88 16 (2) _
AC194970.5_FGP009 3.21 Zea mays 0 482 76 88 28 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(3) AAA_11(1) AAA_16(2) AAA_17(1) AAA_18(1) AAA_19(1) AAA_22(2) AAA_25(1) AAA
TargetP:	Cytoplasm (Class 3 C0.083; M0.280; S0.028; _0.695)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	469 aa (-cTP 430)
Molecular Weight	52.11 kDA(-cTP )
PI	5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1618	Detail								[A. thaliana]		m48
2286	Detail								[A. thaliana]		Clp C1 WT
2288	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
15496452(nucleolus)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
21693672(wound-regulated leaf proteome (AOS mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data