PPDB

PPDB	The Plant Proteome Database

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AT5G67570.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

DG1 - (delayed greening 1) PPR protein (EMB1408)
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 18400937 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G30610.2 11 Arabidopsis thaliana 6E-119 483 39 61 1 (1) C
AT1G30610.1 11 Arabidopsis thaliana 1E-114 511 38 58 2 (2) C
AT5G02860.1 11 Arabidopsis thaliana 5E-31 460 25 43 0 (0) C
Os05g25060.1 7 Oryza sativa 0 743 44 63 0 (0) C
Os01g48380.2 7 Oryza sativa 4E-137 594 38 59 2 (2) C
Os01g48380.1 7 Oryza sativa 3E-136 583 38 59 2 (2) C
v1_AC185612.3_FGP001 4a53 Zea mays 0 641 46 62 3 (3) C
Zm00001eb065550_P001 agpv5 Zea mays 0 717 46 64 0 (0) C
Zm00001eb065550_P002 agpv5 Zea mays 0 717 46 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(8) PPR_1(7) PPR_2(7) PPR_3(7) PPR_long(4) TPR_14(4) TPR_19(2)
TargetP:	Cytoplasm (Class 2 C0.189; M0.143; S0.048; _0.803)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	798 aa (-cTP 791)
Molecular Weight	92.06 kDA(-cTP )
PI	5.42(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data