PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G67530.1 plant U-box 49

Lab Annot.

Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G01940.1 11 Arabidopsis thaliana 3E-52 155 52 65 1 (1) _
AT2G36130.1 11 Arabidopsis thaliana 6E-48 152 47 69 17 (17) _
AT3G44600.1 11 Arabidopsis thaliana 1E-39 151 47 66 3 (3) _
Os03g10400.2 7 Oryza sativa 0 467 69 82 0 (0) _
Os06g04000.1 7 Oryza sativa 6E-54 155 54 65 2 (2) _
Os08g44520.3 7 Oryza sativa 2E-47 151 49 69 0 (0) _
Zm00001eb007780_P001 agpv5 Zea mays 0 596 73 85 0 (0) _
GRMZM2G007486_P02 3.21 Zea mays 0 596 73 85 0 (0) _
v1_GRMZM2G007486_P02 4a53 Zea mays 0 596 73 85 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Pro_isomerase(1) Rtf2(3) U-box(1) zf-NOSIP(1) zf-Nse(1)
TargetP:	Cytoplasm (Class 2 C0.050; M0.148; S0.085; _0.921)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	595 aa (-cTP 578)
Molecular Weight	65.02 kDA(-cTP )
PI	8.34(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1665	Detail								[A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data