PPDB

 The Plant Proteome Database

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AT5G67400.1   root hair specific 19
Lab Annot.
Mapman: 26.12 misc.peroxidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49960.1 11Arabidopsis thaliana032981881 (1)S
AT4G37530.1 11Arabidopsis thaliana3E-17130772844 (0)S
AT4G37520.1 11Arabidopsis thaliana3E-17130574835 (3)S
Os07g02440.1 7Oryza sativa2E-14530563760 (0)S
Os03g55420.1 7Oryza sativa1E-14131860740 (0)S
Os09g32964.1 7Oryza sativa2E-12630458718 (8)S
v1_GRMZM2G136042_P01 4a53Zea mays7E-13730459740 (0)S
GRMZM2G136042_P01 3.21Zea mays7E-13730459740 (0)S
Zm00001eb058260_P001 agpv5Zea mays1E-13530759750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: peroxidase(1)
TargetP: Secreted (Class 1 C0.019; M0.101; S0.922; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 329 aa (-cTP 282)
Molecular Weight 35.93 kDA(-cTP )
PI 9.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help