PPDB

The Plant Proteome Database

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AT5G67385.1   Phototropic-responsive NPH3 family protein

Lab Annot. signal transducer
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G67385.4 11Arabidopsis thaliana05591001000 (0)_
AT5G67385.2 11Arabidopsis thaliana05591001000 (0)_
AT5G67385.3 11Arabidopsis thaliana05591001000 (0)_
Os03g10880.1 7Oryza sativa064352675 (5)_
Os03g10880.2 7Oryza sativa057852665 (5)S
Os11g02620.1 7Oryza sativa5E-14354244650 (0)C
Zm00001eb007280_P002 agpv5Zea mays062354700 (0)_
GRMZM2G004523_P01 3.21Zea mays062354701 (0)_
Zm00001eb007280_P003 agpv5Zea mays062354690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATG16(1) CDC13_N(2) Cnn_1N(1) Mto2_bdg(1) NPH3(2) Shugoshin_N(2)
TargetP: Chloroplast (Class 5 C0.478; M0.061; S0.138; _0.396)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 604 aa (-cTP 583)
Molecular Weight 67.56 kDA(-cTP 65.18)
PI 8.15(-cTP 7.11)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21693672(wound-regulated leaf proteome (wt))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help