PPDB

The Plant Proteome Database

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AT5G67370.1   DUF1230 family protein (DUF1230)

Lab Annot. CGLD27 with DUF1230 (Fe deficiency)
Mapman: 35.2 not assigned.unknown
Curated Location plastid
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11840.1 11Arabidopsis thaliana1E-4217546655 (5)C
AT5G11840.3 11Arabidopsis thaliana5E-3714947660 (0)C
AT5G11840.4 11Arabidopsis thaliana2E-3613650680 (0)C
Os03g32490.1 7Oryza sativa4E-11726970810 (0)M
Os05g46250.1 7Oryza sativa2E-3818542570 (0)C
Os05g46250.2 7Oryza sativa2E-1812638530 (0)C
Zm00001eb393560_P003 agpv5Zea mays8E-12326771820 (0)S
v1_GRMZM2G137816_P01 4a53Zea mays8E-12326771822 (2)S
GRMZM2G137816_P01 3.21Zea mays8E-12326771823 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1230(1)
TargetP: Mitochondria (Class 3 C0.064; M0.672; S0.035; _0.213)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 327 aa (-cTP 269)
Molecular Weight 36.11 kDA(-cTP )
PI 7.60(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21515685(GreenCut2)

Comparative Proteomics Data


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