PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G67300.1   myb domain protein r1

Lab Annot.
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G50060.1 11Arabidopsis thaliana1E-10330360690 (0)_
AT4G37260.1 11Arabidopsis thaliana6E-9729057670 (0)_
AT2G23290.1 11Arabidopsis thaliana1E-8129451609 (9)_
Os09g01960.1 7Oryza sativa1E-6618360720 (0)_
Os02g09480.1 7Oryza sativa8E-6517562690 (0)_
Os06g43090.1 7Oryza sativa9E-6430343520 (0)_
Zm00001eb307400_P001 agpv5Zea mays5E-7619263740 (0)C
GRMZM2G050550_P01 3.21Zea mays5E-7619263740 (0)C
v1_GRMZM2G050550_P01 4a53Zea mays5E-7619263740 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Myb_DNA-bind_6(2) Myb_DNA-bind_7(2) Myb_DNA-binding(2)
TargetP: Cytoplasm (Class 3 C0.306; M0.055; S0.015; _0.878)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 305 aa (-cTP 243)
Molecular Weight 33.27 kDA(-cTP )
PI 7.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help