PPDB

 The Plant Proteome Database

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AT5G67290.1   FAD-dependent oxidoreductase family protein
Lab Annot. FAD-dependent oxidoreductase protein
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os07g06080.1 7Oryza sativa7E-13636857700 (0)M
Os01g41160.1 7Oryza sativa2E-4826841520 (0)M
Zm00001eb300250_P005 agpv5Zea mays2E-13536658700 (0)M
Zm00001eb300250_P006 agpv5Zea mays2E-13536658700 (0)M
GRMZM2G025977_P01 3.21Zea mays8E-13536658690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 3HCDH_N(1) ApbA(1) DAO(1) FAD_binding_2(2) FAD_binding_3(2) FAD_oxidored(1) GIDA
TargetP: Chloroplast (Class 5 C0.255; M0.213; S0.027; _0.168)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 406 aa (-cTP 380) (-lTP 296)
Molecular Weight 43.11 kDA(-cTP 40.29)(-lTP 31.69)
PI 7.54(-cTP 6.41)(-lTP 5.297)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
2296Detail        [A. thaliana] Clp C1 WT
2310Detail       leaf [A. thaliana] PG plastoglobule 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP

* For details about the exprimental sources click here.

Published Proteomics Data

 20423899(chloroplast)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help