PPDB

PPDB	The Plant Proteome Database

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AT5G67210.1 IRREGULAR XYLEM protein (DUF579)

Lab Annot.

Protein of unknown function (DUF579)
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G50220.1 11 Arabidopsis thaliana 0 324 83 88 0 (0) _
AT2G15440.1 11 Arabidopsis thaliana 2E-80 228 51 71 0 (0) _
AT1G71690.1 11 Arabidopsis thaliana 7E-55 279 38 57 0 (0) S
Os06g47310.1 7 Oryza sativa 3E-81 325 42 58 6 (6) _
Os04g55640.1 7 Oryza sativa 6E-78 299 43 61 4 (4) M
Os02g06380.1 7 Oryza sativa 1E-70 234 49 64 0 (0) C
Zm00001eb232590_P002 agpv5 Zea mays 2E-83 294 47 63 0 (0) C
Zm00001eb232590_P001 agpv5 Zea mays 2E-83 294 47 63 0 (0) C
v1_GRMZM2G085513_P01 4a53 Zea mays 2E-83 294 47 63 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HupE_UreJ_2(1) PHM7_cyt(2) Polysacc_synt_4(1) TRP(1)
TargetP:	Cytoplasm (Class 4 C0.007; M0.319; S0.025; _0.555)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	317 aa (-cTP 269)
Molecular Weight	35.66 kDA(-cTP )
PI	8.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data