PPDB

PPDB	The Plant Proteome Database

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AT5G67140.1 F-box/RNI-like superfamily protein

Lab Annot.

F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G77000.3 11 Arabidopsis thaliana 5E-15 205 27 50 0 (0) _
AT1G77000.4 11 Arabidopsis thaliana 5E-15 205 27 50 0 (0) _
AT1G21410.2 11 Arabidopsis thaliana 7E-15 213 26 48 0 (0) _
Os06g07000.1 7 Oryza sativa 1E-87 212 58 75 0 (0) C
Os06g07000.2 7 Oryza sativa 4E-84 212 57 74 0 (0) C
Os06g07000.3 7 Oryza sativa 5E-57 151 58 75 0 (0) C
Zm00001eb375600_P001 agpv5 Zea mays 1E-89 214 60 76 0 (0) _
Zm00001eb375600_P002 agpv5 Zea mays 3E-86 214 58 74 0 (0) _
GRMZM6G107785_P01 3.21 Zea mays 1E-63 145 64 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(1) F-box_4(2) LRR_1(3) LRR_4(3) LRR_6(3)
TargetP:	Cytoplasm (Class 5 C0.024; M0.030; S0.390; _0.480)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	228 aa (-cTP 185)
Molecular Weight	25.38 kDA(-cTP )
PI	8.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data