PPDB

PPDB	The Plant Proteome Database

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AT5G67120.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G34040.1 11 Arabidopsis thaliana 5E-19 90 41 64 0 (0) _
AT1G45180.1 11 Arabidopsis thaliana 1E-18 89 49 65 0 (0) _
AT1G45180.3 11 Arabidopsis thaliana 1E-18 89 49 65 0 (0) _
Os04g55510.1 7 Oryza sativa 2E-18 90 42 64 0 (0) _
Os05g48970.1 7 Oryza sativa 3E-18 94 41 57 0 (0) _
Os04g51400.3 7 Oryza sativa 1E-17 141 36 53 0 (0) _
v1_GRMZM2G174926_P02 4a53 Zea mays 9E-20 91 42 65 0 (0) _
GRMZM2G174926_P02 3.21 Zea mays 9E-20 91 42 65 0 (0) _
Zm00001eb432070_P003 agpv5 Zea mays 1E-19 90 43 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Endonuclease_7(1) FANCL_C(1) GyrI-like(2) PHD(1) Prok-RING_1(2) Prok-RING_4(1) R
TargetP:	Cytoplasm (Class 2 C0.093; M0.116; S0.117; _0.909)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	272 aa (-cTP 251)
Molecular Weight	31.54 kDA(-cTP )
PI	4.07(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data