PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G67110.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G67110.3 11Arabidopsis thaliana6E-13321089890 (0)C
AT5G67110.2 11Arabidopsis thaliana2E-8713990940 (0)C
AT4G36930.1 11Arabidopsis thaliana9E-306979890 (0)_
Os06g06900.1 7Oryza sativa2E-308472820 (0)_
Os02g56140.1 7Oryza sativa9E-297772840 (0)_
Os01g18290.1 6Oryza sativa2E-279858730 (0)_
Zm00001eb375660_P002 agpv5Zea mays1E-307081900 (0)M
Zm00001eb375660_P001 agpv5Zea mays1E-307081900 (0)M
Zm00001eb375660_P004 agpv5Zea mays3E-307081900 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(2)
TargetP: Chloroplast (Class 3 C0.830; M0.085; S0.008; _0.329)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 155)
Molecular Weight 22.96 kDA(-cTP 17.18)
PI 9.18(-cTP 9.52)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help