PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G67010.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20350.1 11Arabidopsis thaliana5E-6515569780 (0)_
AT5G67000.1 11Arabidopsis thaliana2E-6015962750 (0)C
AT3G61630.1 11Arabidopsis thaliana3E-134967810 (0)M
Os09g28440.1 7Oryza sativa9E-1815534450 (0)_
Os08g36920.1 7Oryza sativa2E-1615234480 (0)_
Os07g10410.1 7Oryza sativa6E-124862720 (0)M
v1_GRMZM2G138396_P01 4a53Zea mays7E-1515334440 (0)_
Zm00001eb100800_P001 agpv5Zea mays7E-1515334440 (0)_
GRMZM2G138396_P01 3.21Zea mays7E-1515334440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 4 C0.306; M0.186; S0.054; _0.616)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 162 aa (-cTP 132)
Molecular Weight 17.60 kDA(-cTP )
PI 6.52(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help