PPDB

 The Plant Proteome Database

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AT5G66720.1   Protein phosphatase 2C family protein
Lab Annot. 5-azacytidine resistance protein -related (Not plastid in Pubmed 19440515)
Mapman: 35.1 not assigned.no ontology
Curated Location plastid stroma (Pubmed: 19440515 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G66720.2 11Arabidopsis thaliana0414999941 (33)C
AT4G16580.1 11Arabidopsis thaliana3E-13638357711 (1)M
AT4G33500.1 11Arabidopsis thaliana5E-492474060118 (115)C
Os03g59470.1 7Oryza sativa4E-12329460770 (0)_
Os03g09220.6 7Oryza sativa2E-5424544580 (0)_
Os03g09220.4 7Oryza sativa2E-5424544580 (0)_
Zm00001eb061960_P004 agpv5Zea mays1E-12528863770 (0)M
Zm00001eb061960_P002 agpv5Zea mays1E-12528863770 (0)M
Zm00001eb061960_P003 agpv5Zea mays1E-12528863770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Bac_A_amyl_C(1) PP2C(2) PP2C_2(1) SpoIIE(1)
TargetP: Chloroplast (Class 4 C0.862; M0.469; S0.002; _0.029)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 414 aa (-cTP 369)
Molecular Weight 43.87 kDA(-cTP 38.83)
PI 7.60(-cTP 5.87)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
195_194Detail       leaf [A. thaliana] chloroplast stromaffc1-2
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1456Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2060Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2084Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2310Detail       leaf [A. thaliana] PG plastoglobule 
2311Detail       leaf [A. thaliana] PG plastoglobule 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2319Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 18633119(stroma)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19888209(leaves)
21173025(root proteome)

Comparative Proteomics Data

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