PPDB

PPDB	The Plant Proteome Database

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AT5G66720.1 Protein phosphatase 2C family protein

Lab Annot.

5-azacytidine resistance protein -related (Not plastid in Pubmed 19440515)
Mapman: 35.1 not assigned.no ontology

Curated Location

plastid stroma (Pubmed: 19440515 ) (supported by in-house exprements)

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G66720.2 11 Arabidopsis thaliana 0 414 99 99 57 (24) C
AT4G16580.1 11 Arabidopsis thaliana 3E-136 383 57 71 1 (0) M
AT4G33500.1 11 Arabidopsis thaliana 5E-49 247 40 60 124 (96) C
Os03g59470.1 7 Oryza sativa 4E-123 294 60 77 0 (0) _
Os03g09220.6 7 Oryza sativa 2E-54 245 44 58 0 (0) _
Os03g09220.4 7 Oryza sativa 2E-54 245 44 58 0 (0) _
Zm00001eb061960_P004 agpv5 Zea mays 1E-125 288 63 77 0 (0) M
Zm00001eb061960_P002 agpv5 Zea mays 1E-125 288 63 77 0 (0) M
Zm00001eb061960_P003 agpv5 Zea mays 1E-125 288 63 77 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bac_A_amyl_C(1) PP2C(2) PP2C_2(1) SpoIIE(1)
TargetP:	Chloroplast (Class 4 C0.862; M0.469; S0.002; _0.029)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	414 aa (-cTP 369)
Molecular Weight	43.87 kDA(-cTP 38.83)
PI	7.60(-cTP 5.87)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
195_194	Detail								leaf [A. thaliana]	chloroplast stroma	ffc1-2
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1455	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1456	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1458	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 1)
1459	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 2)
1461	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 1)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1463	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 3)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2060	Detail								Total leaf [A. thaliana]	chloroplast stroma	wt and cgep
2084	Detail								Total leaf [A. thaliana]	total soluble	wt & clpt1xclpt2
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18633119(stroma)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19888209(leaves)
21173025(root proteome)

Comparative Proteomics Data