PPDB

PPDB	The Plant Proteome Database

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AT5G66500.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03580.1 11 Arabidopsis thaliana 6E-88 503 33 56 0 (0) C
AT5G27110.1 11 Arabidopsis thaliana 2E-86 505 34 53 2 (2) M
AT5G39350.1 11 Arabidopsis thaliana 1E-85 508 33 53 0 (0) M
Os03g42650.2 7 Oryza sativa 2E-107 434 38 60 0 (0) M
Os03g42650.1 7 Oryza sativa 2E-107 434 38 60 0 (0) M
Os01g74600.1 7 Oryza sativa 6E-90 536 32 56 0 (0) C
GRMZM2G079925_P01 3.21 Zea mays 6E-94 440 37 57 0 (0) M
Zm00001eb413360_P001 agpv5 Zea mays 6E-94 440 37 57 0 (0) M
v1_GRMZM2G079925_P01 4a53 Zea mays 6E-94 440 37 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aldolase_II(1) Clathrin(3) Peptidase_M3(1) PPR(11) PPR_1(8) PPR_2(9) PPR_3(4) PP
TargetP:	Mitochondria (Class 2 C0.018; M0.757; S0.059; _0.022)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	532 aa (-cTP 520)
Molecular Weight	58.91 kDA(-cTP )
PI	8.41(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data