PPDB

PPDB	The Plant Proteome Database

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AT5G66470.1 GTP-binding protein Era-like protein

Lab Annot.

GTPase Era 1 (ERA1)
Mapman: 29.2.7* protein.synthesis.ribosome biogenesis

Curated Location

plastid stroma (Pubmed: 23198870 25566271 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G66470.2 11 Arabidopsis thaliana 0 427 100 100 0 (0) C
AT1G30960.1 11 Arabidopsis thaliana 9E-25 301 26 50 0 (0) M
AT3G12080.1 11 Arabidopsis thaliana 8E-11 194 25 43 88 (56) C
Os05g49220.2 7 Oryza sativa 8E-134 236 73 90 2 (2) _
Os05g49220.1 7 Oryza sativa 9E-111 211 71 88 0 (0) C
Os08g10649.1 7 Oryza sativa 6E-25 281 26 49 0 (0) M
GRMZM2G158024_P02 3.21 Zea mays 0 330 74 90 81 (50) C
v1_GRMZM2G158024_P02 4a53 Zea mays 0 330 74 90 34 (34) C
Zm00001eb343970_P002 agpv5 Zea mays 0 330 74 90 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_18(1) AIG1(1) ATP_bind_1(2) DUF2525(2) Dynamin_N(2) FeoB_N(1) GTP_EFTU(1) KH
TargetP:	Chloroplast (Class 2 C0.813; M0.109; S0.006; _0.147)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	427 aa (-cTP 388)
Molecular Weight	48.93 kDA(-cTP 44.36)
PI	6.59(-cTP 5.84)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
541	Detail								leaf [A. thaliana]	stroma (FPLC) >1 MDa stroma	wild-type
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1179	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
2290	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data