PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G66330.1   Leucine-rich repeat (LRR) family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G15320.1 11Arabidopsis thaliana4E-64393355212 (11)S
AT3G59510.1 11Arabidopsis thaliana4E-4639933490 (0)S
AT5G49770.1 11Arabidopsis thaliana1E-3532636510 (0)S
Os02g43250.1 7Oryza sativa6E-7841040550 (0)S
Os05g33690.3 7Oryza sativa3E-3939933460 (0)S
Os05g33690.1 7Oryza sativa3E-3939933460 (0)S
Zm00001eb186170_P001 agpv5Zea mays3E-8540339570 (0)S
v1_GRMZM2G065021_P01 4a53Zea mays3E-8540339570 (0)S
GRMZM2G065021_P01 3.21Zea mays3E-8540339570 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(10) LRR_4(7) LRR_6(7) LRR_8(4)
TargetP: Secreted (Class 2 C0.046; M0.025; S0.833; _0.133)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 418 aa (-cTP 378)
Molecular Weight 45.33 kDA(-cTP )
PI 5.10(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help