PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G66100.1   winged-helix DNA-binding transcription factor family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G66100.2 11Arabidopsis thaliana03471001000 (0)C
AT4G35890.1 11Arabidopsis thaliana1E-4937836530 (0)C
AT4G35890.2 11Arabidopsis thaliana1E-3033134500 (0)C
Os03g06070.1 7Oryza sativa6E-3217840572 (2)_
Os09g36920.1 7Oryza sativa8E-2310546642 (2)C
Os03g64190.1 7Oryza sativa2E-208243740 (0)C
Zm00001eb403210_P001 agpv5Zea mays4E-3117240590 (0)_
GRMZM2G140339_P01 3.21Zea mays2E-2916641610 (0)C
Zm00001eb004290_P001 agpv5Zea mays3E-2916641610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: La(1)
TargetP: Chloroplast (Class 2 C0.767; M0.129; S0.014; _0.115)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 453 aa (-cTP 451)
Molecular Weight 49.07 kDA(-cTP 48.80)
PI 8.01(-cTP 8.16)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help