PPDB

PPDB	The Plant Proteome Database

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AT5G66070.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G66070.5 11 Arabidopsis thaliana 7E-162 221 100 100 0 (0) _
AT5G66070.2 11 Arabidopsis thaliana 2E-156 245 90 90 0 (0) _
AT5G66070.4 11 Arabidopsis thaliana 3E-126 181 100 100 0 (0) _
Os10g39770.1 7 Oryza sativa 6E-80 209 55 72 0 (0) _
Os06g50370.1 7 Oryza sativa 7E-69 201 50 70 0 (0) _
Os07g29600.1 7 Oryza sativa 7E-64 189 51 69 0 (0) C
GRMZM2G052344_P03 3.21 Zea mays 1E-73 204 52 72 0 (0) _
v1_GRMZM2G052344_P03 4a53 Zea mays 1E-73 204 52 72 0 (0) _
Zm00001eb022630_P001 agpv5 Zea mays 1E-73 204 52 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bacteriocin_IIc(1) DUF1269(3) DUF5862(2) FANCL_C(1) Gly-zipper_Omp(1) Gly-zipper
TargetP:	Cytoplasm (Class 5 C0.002; M0.146; S0.495; _0.687)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	3 TMs
TAT position:
Length	221 aa (-cTP 156)
Molecular Weight	24.11 kDA(-cTP )
PI	6.11(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data