PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G66050.1   Wound-responsive family protein

Lab Annot. UVR4 (DUF151 and UVR domain)
Mapman: 35.2 not assigned.unknown
Curated Location plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G66050.3 11Arabidopsis thaliana03241001000 (0)C
AT5G66050.4 11Arabidopsis thaliana031198990 (0)C
AT5G66050.2 11Arabidopsis thaliana024610010070 (12)M
Os08g26870.2 7Oryza sativa3E-2918638560 (0)_
Os08g26870.3 7Oryza sativa3E-2918638560 (0)_
Os08g26870.1 7Oryza sativa5E-2719237540 (0)_
GRMZM2G006468_P03 3.21Zea mays4E-2818637561 (1)C
GRMZM2G006468_P02 3.21Zea mays4E-2818637561 (1)C
v1_GRMZM2G006468_P04 4a53Zea mays4E-2818637563 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF151(1) Peptidase_C71(1) UVR(1)
TargetP: Chloroplast (Class 1 C0.971; M0.017; S0.014; _0.033)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 340 aa (-cTP 268)
Molecular Weight 37.22 kDA(-cTP 29.67)
PI 6.54(-cTP 5.40)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2289Detail        [A. thaliana] Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help