PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G66010.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G66010.2 11Arabidopsis thaliana2E-1111581001000 (0)M
AT3G20890.1 11Arabidopsis thaliana9E-6328941571 (1)_
AT3G20890.2 11Arabidopsis thaliana3E-4220339560 (0)S
Os11g03890.1 7Oryza sativa2E-9630354642 (2)_
Os12g03710.1 7Oryza sativa3E-8221261740 (0)_
Os02g58600.1 7Oryza sativa5E-288662740 (0)_
GRMZM2G159028_P01 3.21Zea mays6E-84290526128 (16)_
v1_GRMZM2G159028_P01 4a53Zea mays6E-84290526141 (41)_
Zm00001eb297160_P002 agpv5Zea mays6E-8429052610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(2)
TargetP: Mitochondria (Class 4 C0.031; M0.748; S0.013; _0.459)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 255 aa (-cTP 176)
Molecular Weight 28.59 kDA(-cTP )
PI 9.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help