PPDB

 The Plant Proteome Database

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AT5G65980.1   Auxin efflux carrier family protein
Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G65980.2 11Arabidopsis thaliana035899990 (0)S
AT2G17500.2 11Arabidopsis thaliana039664830 (0)S
AT2G17500.1 11Arabidopsis thaliana039664830 (0)S
Os09g38130.1 7Oryza sativa1E-17042854740 (0)S
Os09g38210.1 7Oryza sativa1E-16142355730 (0)S
Os09g38130.2 7Oryza sativa4E-14537353730 (0)S
Zm00001eb320680_P002 agpv5Zea mays7E-15642952700 (0)S
Zm00001eb316860_P001 agpv5Zea mays4E-11441841630 (0)S
GRMZM2G007481_P01 3.21Zea mays1E-11341841630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Mem_trans(1)
TargetP: Secreted (Class 1 C0.007; M0.029; S0.948; _0.095)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 8 TMs
TAT position:
Length 395 aa (-cTP 359)
Molecular Weight 43.07 kDA(-cTP )
PI 6.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help