PPDB

The Plant Proteome Database

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AT5G65900.1   DEA(D/H)-box RNA helicase family protein

Lab Annot. DEAD box RNA helicase (RH27)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18600.1 11Arabidopsis thaliana0493648113 (10)_
AT5G54910.1 11Arabidopsis thaliana4E-10344741601 (1)_
AT2G40700.1 11Arabidopsis thaliana2E-8657434510 (0)_
Os03g58810.1 7Oryza sativa048559750 (0)C
Os06g34420.1 7Oryza sativa3E-10025559780 (0)C
Os07g33340.1 7Oryza sativa9E-9745039590 (0)M
Zm00001eb053970_P001 agpv5Zea mays051754700 (0)C
Zm00001eb407490_P003 agpv5Zea mays054950660 (0)_
Zm00001eb212700_P001 agpv5Zea mays048559750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_22(1) DEAD(1) DUF4217(1) Helicase_C(2) Nop14(1)
TargetP: Cytoplasm (Class 2 C0.169; M0.095; S0.122; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 633 aa (-cTP 607)
Molecular Weight 72.05 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help