PPDB

PPDB	The Plant Proteome Database

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AT5G65810.1 transmembrane protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49720.1 11 Arabidopsis thaliana 7E-169 261 86 92 120 (111) M
AT3G49720.3 11 Arabidopsis thaliana 7E-169 261 86 92 0 (0) M
AT3G49720.2 11 Arabidopsis thaliana 7E-169 261 86 92 109 (100) M
Os01g05070.1 7 Oryza sativa 2E-117 258 64 78 10 (10) _
Os01g05070.2 7 Oryza sativa 3E-115 257 64 77 10 (10) _
Zm00001eb335800_P002 agpv5 Zea mays 7E-116 258 62 77 0 (0) M
GRMZM2G011031_P01 3.21 Zea mays 7E-116 258 62 77 6 (6) M
v1_GRMZM2G011031_P01 4a53 Zea mays 7E-116 258 62 77 6 (5) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3419(1) Methyltransf_11(1) Methyltransf_25(1) MetW(1)
TargetP:	Mitochondria (Class 3 C0.062; M0.788; S0.013; _0.223)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	258 aa (-cTP 224)
Molecular Weight	28.30 kDA(-cTP )
PI	9.24(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

16247729(mature Pollen)
19546170(mature pollen grains)
19253305(phosphoproteins (etiolated seedling))
21173025(root proteome)

Comparative Proteomics Data