PPDB

The Plant Proteome Database

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AT5G65730.1   xyloglucan endotransglucosylase/hydrolase 6

Lab Annot. xyloglucan endotransglucosylase/hydrolase 6
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G37800.1 11Arabidopsis thaliana2E-1662817686194 (113)S
AT5G13870.1 11Arabidopsis thaliana2E-10928352686 (6)S
AT5G13870.3 11Arabidopsis thaliana2E-10928352680 (0)S
Os11g33270.1 7Oryza sativa3E-10125752710 (0)S
Os06g48160.1 7Oryza sativa8E-9429745643 (3)S
Os07g34580.1 7Oryza sativa2E-8926450670 (0)S
Zm00001eb197870_P001 agpv5Zea mays2E-9625952690 (0)S
GRMZM2G004699_P01 3.21Zea mays2E-9625952698 (8)S
v1_GRMZM2G004699_P01 4a53Zea mays2E-9625952695 (5)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_16(1) XET_C(1)
TargetP: Secreted (Class 2 C0.008; M0.241; S0.865; _0.078)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 292 aa (-cTP 265)
Molecular Weight 33.69 kDA(-cTP )
PI 6.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1752Detail        [A. thaliana] ORMM1
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2296Detail        [A. thaliana] Clp C1 WT
2301Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(seedling)
15815986(Leaf)
17216043(leaf)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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