PPDB

 The Plant Proteome Database

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AT5G65685.1   UDP-Glycosyltransferase superfamily protein
Lab Annot. starch synthase 5 (SS5)
Mapman: 2.1.2.2 major CHO metabolism.synthesis.starch.starch synthase
Curated Location plastid
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G65685.5 11Arabidopsis thaliana04601001000 (0)M
AT5G65685.12 11Arabidopsis thaliana04581001000 (0)C
AT5G65685.11 11Arabidopsis thaliana04601001000 (0)M
Os02g56320.1 7Oryza sativa3E-13740353690 (0)C
Os05g45720.4 7Oryza sativa6E-7532437600 (0)C
Os05g45720.3 7Oryza sativa2E-7432437600 (0)C
Zm00001eb191890_P002 agpv5Zea mays6E-13842050670 (0)C
v1_GRMZM2G130043_P02 4a53Zea mays3E-13742050673 (3)C
GRMZM2G130043_P01 3.21Zea mays5E-13642050675 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: APG6_N(1) DUF3276(1) Glyco_trans_4_2(4) Glyco_trans_4_4(2) Glyco_transf_4(2) Gly
TargetP: Chloroplast (Class 3 C0.812; M0.265; S0.035; _0.070)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 460 aa (-cTP 421)
Molecular Weight 52.06 kDA(-cTP 47.65)
PI 5.88(-cTP 5.26)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2316Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help