PPDB

PPDB	The Plant Proteome Database

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AT5G65683.1 Zinc finger (C3HC4-type RING finger) family protein

Lab Annot.

Zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G37890.2 11 Arabidopsis thaliana 4E-169 748 46 62 1 (1) _
AT2G22680.1 11 Arabidopsis thaliana 6E-165 750 44 60 0 (0) _
AT4G37890.1 11 Arabidopsis thaliana 6E-165 776 44 60 1 (1) _
Os04g01160.1 7 Oryza sativa 3E-90 776 35 49 0 (0) M
Os02g56280.1 7 Oryza sativa 7E-50 588 29 44 0 (0) _
Os03g04890.1 7 Oryza sativa 9E-50 575 30 47 0 (0) M
Zm00001eb418990_P001 agpv5 Zea mays 9E-100 796 36 51 0 (0) _
Zm00001eb089670_P002 agpv5 Zea mays 4E-89 815 34 49 0 (0) _
Zm00001eb089670_P003 agpv5 Zea mays 3E-80 650 36 52 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CTU2(1) DUF1272(1) FANCL_C(1) PHD(1) Prok-RING_4(2) VWA(1) VWA_2(1) VWA_3(1) zf-
TargetP:	Chloroplast (Class 4 C0.401; M0.141; S0.000; _0.177)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	717 aa (-cTP 653)
Molecular Weight	78.58 kDA(-cTP 71.50)
PI	9.63(-cTP 9.37)

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data