PPDB

PPDB	The Plant Proteome Database

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AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G65560.3 11 Arabidopsis thaliana 0 915 100 100 0 (0) M
AT5G65560.2 11 Arabidopsis thaliana 0 915 100 100 0 (0) M
AT1G77340.1 11 Arabidopsis thaliana 1E-152 411 57 70 0 (0) M
Os06g47570.1 7 Oryza sativa 0 957 35 53 0 (0) C
Os02g37140.1 7 Oryza sativa 6E-177 730 38 60 0 (0) C
Os02g37140.2 7 Oryza sativa 6E-177 730 38 60 0 (0) C
v1_GRMZM2G435761_P01 4a53 Zea mays 0 976 34 51 0 (0) M
Zm00001eb164240_P001 agpv5 Zea mays 0 976 34 51 0 (0) M
GRMZM2G435761_P01 3.21 Zea mays 0 976 34 51 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(5) ANAPC3(4) ATP13(7) Clathrin(5) DUF1450(2) DUF2496(2) ECSIT(5) Mad3_BUB1_
TargetP:	Mitochondria (Class 5 C0.460; M0.471; S0.001; _0.144)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	915 aa (-cTP 857)
Molecular Weight	103.54 kDA(-cTP )
PI	7.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data