PPDB

PPDB	The Plant Proteome Database

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AT5G65350.1 histone 3 11

Lab Annot.

histone H3
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone

Curated Location

nucleus

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G65360.1 11 Arabidopsis thaliana 1E-90 136 95 98 22 (22) C
AT5G10400.1 11 Arabidopsis thaliana 1E-90 136 95 98 22 (22) C
AT5G10390.1 11 Arabidopsis thaliana 1E-90 136 95 98 22 (22) C
Os11g05730.1 7 Oryza sativa 1E-90 136 95 98 18 (18) C
Os06g06460.1 7 Oryza sativa 1E-90 136 95 98 18 (18) C
Os06g06510.1 7 Oryza sativa 1E-90 136 95 98 18 (18) C
Zm00001eb422190_P001 agpv5 Zea mays 1E-90 136 95 98 0 (0) C
Zm00001eb271240_P001 agpv5 Zea mays 1E-90 136 95 98 0 (0) C
GRMZM2G179005_P02 3.21 Zea mays 1E-90 136 95 98 91 (91) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(1) CENP-S(1) CENP-T_C(1) Histone(1) PAF(1) Sirohm_synth_M(2)
TargetP:	Chloroplast (Class 4 C0.690; M0.366; S0.012; _0.060)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	139 aa (-cTP 86)
Molecular Weight	15.59 kDA(-cTP 9.92)
PI	11.25(-cTP 9.80)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1617	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1765	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

18814325(cotyledons)

Comparative Proteomics Data