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AT5G65250.1
transmembrane protein
|
| Lab Annot. |
unknown protein
Mapman: 35.2 not assigned.unknown |
| Curated Location |
plastid (Pubmed: 23198870 )
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
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| Acc | ver | Species | Evalue | Matchlen | %Iden | %Similar | #spots | TargetP |
| Os08g37820.1 | 7 | Oryza sativa | 1E-35 | 206 | 45 | 63 | 0 (0) | C |
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
V_ATPase_I(1) YebO(2) |
| TargetP: |
Chloroplast (Class 3 C0.900; M0.428; S0.002; _0.012) |
| Predotar: |
|
| Subcel. Location: |
Thylakoid membrane |
| TM-HMM prediction: |
2 TMs |
| Aramemnon: |
2 TMs |
| TAT position: |
|
| Length |
300 aa (-cTP 269) (-lTP 231) |
| Molecular Weight |
33.22 kDA(-cTP 29.83)(-lTP 25.42) |
| PI |
9.93(-cTP 9.72)(-lTP 9.460) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 640 | Detail | | | | | | | | leaf [A. thaliana] | plastid nucleoid | wild-type |
| 667 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | wild-type (rep. 2-1) |
| 669 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2 (rep. 1-1) |
| 686 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2 (rep. 1-2) |
| 692 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | wild-type (rep. 1-2) |
| 776 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | wild-type (rep. 3 - 10 ug) |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1453 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1525 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1528 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2321 | Detail | | | | | | | | leaf [A. thaliana] | | |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
| 2325 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | abc1k6 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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16618929(MITO/PLASTID-LOPIT-callus)
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
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Comparative Proteomics Data
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