PPDB

 The Plant Proteome Database

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AT5G65110.1   acyl-CoA oxidase 2
Lab Annot. acyl-CoA oxidase 2
Mapman: 11.9.4.2 lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G65110.2 11Arabidopsis thaliana064110010026 (21)_
AT1G06290.1 11Arabidopsis thaliana2E-1096383652123 (80)M
AT1G06310.1 11Arabidopsis thaliana1E-10861737525 (4)M
Os11g39220.1 7Oryza sativa0679768717 (17)_
Os11g39220.2 7Oryza sativa0509829217 (17)_
Os06g24704.1 7Oryza sativa6E-10459536510 (0)M
Zm00001eb083480_P001 agpv5Zea mays056672810 (0)_
v1_GRMZM2G419782_P01 4a53Zea mays061367761 (1)C
GRMZM2G419782_P01 3.21Zea mays061367761 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ACOX(1) Acyl-CoA_dh_1(1) Acyl-CoA_dh_M(1) Acyl-CoA_dh_N(1)
TargetP: Cytoplasm (Class 5 C0.522; M0.119; S0.017; _0.598)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 692 aa (-cTP 644)
Molecular Weight 77.48 kDA(-cTP )
PI 8.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1758Detail       leaf [A. thaliana] total leaf tissue DXS_Flag+fosmidomycin
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2255Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19329564(peroxisomes (leaf))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help