PPDB

The Plant Proteome Database

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AT5G64850.1   sorbin/SH3 domain protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09960.1 11Arabidopsis thaliana7E-4911767740 (0)_
AT5G09960.3 11Arabidopsis thaliana2E-4611069740 (0)_
AT5G09960.2 11Arabidopsis thaliana4E-328766720 (0)_
Os10g26540.1 7Oryza sativa1E-2312141570 (0)_
Os03g07380.1 7Oryza sativa1E-2210447620 (0)_
v1_GRMZM2G162814_P01 4a53Zea mays1E-2412143580 (0)_
GRMZM2G162814_P01 3.21Zea mays1E-2412143580 (0)_
v1_GRMZM2G162814_P03 4a53Zea mays2E-2410447610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AvrRpt-cleavage(1)
TargetP: Cytoplasm (Class 2 C0.077; M0.136; S0.027; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 64)
Molecular Weight 13.32 kDA(-cTP )
PI 9.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18436743(specific to roots)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help