PPDB

The Plant Proteome Database

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AT5G64816.1   thionin-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64816.3 11Arabidopsis thaliana8E-921301001000 (0)C
AT5G64816.4 11Arabidopsis thaliana8E-921301001000 (0)C
AT5G64816.2 11Arabidopsis thaliana8E-921301001002 (2)C
Os03g08710.1 7Oryza sativa4E-75123819514 (14)C
Os03g08710.2 7Oryza sativa4E-75123819514 (14)C
GRMZM2G113401_P02 3.21Zea mays9E-7612382943 (3)C
v1_GRMZM2G113401_P02 4a53Zea mays9E-7612382940 (0)C
v1_GRMZM2G113401_P01 4a53Zea mays7E-75123829413 (13)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cyclotide(1) zf-MYND(1)
TargetP: Chloroplast (Class 5 C0.170; M0.129; S0.138; _0.091)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 130 aa (-cTP 32)
Molecular Weight 14.44 kDA(-cTP 3.67)
PI 8.73(-cTP 8.68)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))
21311031(chloroplasts)
21311031(mitochondria)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help