PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G64630.3   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 27.3.62 RNA.regulation of transcription.Nucleosome/chromatin assembly factor group
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64630.2 11Arabidopsis thaliana04111001000 (0)_
AT5G64630.1 11Arabidopsis thaliana03061001000 (0)_
AT3G44530.1 11Arabidopsis thaliana9E-3446328441 (1)_
Os08g01680.1 7Oryza sativa1E-16043254700 (0)M
Os09g39420.1 7Oryza sativa7E-2929330459 (9)_
Os06g44370.1 7Oryza sativa3E-0710831490 (0)C
GRMZM2G009627_P01 3.21Zea mays2E-16143554700 (0)M
Zm00001eb260310_P001 agpv5Zea mays2E-16143554700 (0)M
v1_GRMZM2G009627_P01 4a53Zea mays2E-16143554700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) Coatomer_WDAD(3) WD40(5)
TargetP: Secreted (Class 1 C0.026; M0.020; S0.938; _0.128)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 428 aa (-cTP 408)
Molecular Weight 47.95 kDA(-cTP )
PI 5.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help