PPDB

 The Plant Proteome Database

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AT5G64430.1   Octicosapeptide/Phox/Bem1p family protein
Lab Annot. octicosapeptide/Phox/Bem1p (PB1)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09620.2 11Arabidopsis thaliana1E-14755754620 (0)_
AT5G09620.1 11Arabidopsis thaliana3E-142595505817 (1)_
AT2G01190.1 11Arabidopsis thaliana2E-371864660236 (69)C
Os02g56480.1 7Oryza sativa3E-3628037482 (2)_
Os01g04650.1 7Oryza sativa5E-27179395610 (10)_
Os07g37040.1 7Oryza sativa2E-2519240560 (0)C
v1_GRMZM2G144146_P01 4a53Zea mays4E-3514950600 (0)_
Zm00001eb258550_P001 agpv5Zea mays4E-3514950600 (0)_
GRMZM2G144146_P01 3.21Zea mays4E-3514950600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PB1(1)
TargetP: Cytoplasm (Class 2 C0.197; M0.101; S0.070; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 513 aa (-cTP 503)
Molecular Weight 56.44 kDA(-cTP )
PI 5.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
429Detail       leaf [A. thaliana]  
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1043Detail       leaf [A. thaliana] plastid - coIP thylakoid membrane 
1044Detail       leaf [A. thaliana] plastid - coIP control  
1197Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1215Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1365Detail        [A. thaliana] chloroplast fractionation  
1366Detail        [A. thaliana] chloroplast fractionation  
1367Detail        [A. thaliana] chloroplast fractionation  
1368Detail        [A. thaliana] chloroplast fractionation  
1369Detail        [A. thaliana] chloroplast fractionation  
1370Detail        [A. thaliana] chloroplast fractionation  
1386Detail        [A. thaliana] chloroplast fractionation  
1387Detail        [A. thaliana] chloroplast fractionation  
1388Detail        [A. thaliana] chloroplast fractionation  
1389Detail        [A. thaliana] chloroplast fractionation  
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1456Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1465Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 1)
1469Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 3)
1476Detail       leaf [A. thaliana] co-IP GST-ClpSmut stroma clpc1 x clps (rep. 4)
1477Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 5)
1478Detail       leaf [A. thaliana] co-IP GST-ClpSmut stroma clpc1 x clps (rep. 5)
1479Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 6)
1480Detail       leaf [A. thaliana] co-IP GST-ClpSmut stroma clpc1 x clps (rep. 6)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1522Detail       leaf [A. thaliana] wild-type
1527Detail       leaf [A. thaliana] co-IP GST-ClpS 10ug bait stromaclpc1 x clps (rep. 2)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1535Detail       leaf [A. thaliana] wild-type
1536Detail       leaf [A. thaliana] wild-type
1588Detail        [A. thaliana]  
1690Detail        [A. thaliana]  
1700Detail        [A. thaliana] Col-0
1701Detail        [A. thaliana] cGep
1702Detail        [A. thaliana] Col-0
1703Detail        [A. thaliana] cGep
1719Detail        [A. thaliana]  
1720Detail        [A. thaliana]  
1725Detail        [A. thaliana]  
1726Detail        [A. thaliana]  
1745Detail        [A. thaliana] Col-0
1751Detail        [A. thaliana] Col-0
1752Detail        [A. thaliana] ORMM1
1983Detail       leaf [A. thaliana] plastid wild-type
2001Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2002Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2089Detail       leaf chloroplasts [A. thaliana] stroma c-gep-5-complemented
2173Detail       leaf [A. thaliana] stroma Clp gst clpF against clpF stroma
2296Detail        [A. thaliana] Clp C1 WT
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 12938931(Total chloroplast envelope)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
17216043(leaf)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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