PPDB

The Plant Proteome Database

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AT5G64420.1   DNA polymerase V family

Lab Annot. DNA polymerase V family
Mapman: 28.2 DNA.repair
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g04270.1 7Oryza sativa0132643608 (8)_
Zm00001eb231630_P001 agpv5Zea mays0130045600 (0)_
v1_GRMZM2G054765_P01 4a53Zea mays01300456027 (27)_
GRMZM2G054765_P01 3.21Zea mays01300456013 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DNA_pol_phi(3) UNC45-central(3) zf-AD(1)
TargetP: Cytoplasm (Class 1 C0.037; M0.104; S0.051; _0.960)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1306 aa (-cTP 1227)
Molecular Weight 146.11 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help