PPDB

PPDB	The Plant Proteome Database

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AT5G64370.1 beta-ureidopropionase

Lab Annot.

beta-ureidopropionase (BETA-UP) , also PYD3
Mapman: 23.2 nucleotide metabolism.degradation

Curated Location

cytosol (Pubmed: 19413687 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G27450.1 11 Arabidopsis thaliana 3E-25 274 30 47 30 (20) _
AT2G27450.2 11 Arabidopsis thaliana 4E-25 274 30 47 30 (20) _
AT2G27450.3 11 Arabidopsis thaliana 1E-22 226 31 47 0 (0) S
Os07g30170.1 7 Oryza sativa 0 401 80 91 0 (0) _
Os02g33080.1 7 Oryza sativa 2E-21 280 28 46 6 (6) _
Os02g33080.2 7 Oryza sativa 1E-17 227 27 44 6 (6) S
Zm00001eb321550_P001 agpv5 Zea mays 0 402 81 89 0 (0) _
GRMZM2G077673_P01 3.21 Zea mays 0 336 86 93 0 (0) M
v1_GRMZM2G077673_P01 4a53 Zea mays 0 336 86 93 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CN_hydrolase(1) DUF2861(1)
TargetP:	Cytoplasm (Class 2 C0.172; M0.094; S0.014; _0.911)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	408 aa (-cTP 380)
Molecular Weight	45.55 kDA(-cTP )
PI	5.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2161	Detail								leaf [A. thaliana]	stroma Clp stroma	P3-strepII 31
2167	Detail								leaf [A. thaliana]	stroma Clp stroma	P3 trap-strepII
2168	Detail								leaf [A. thaliana]	stroma Clp stroma	P3-strepII
2214	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st
2216	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st
2262	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2296	Detail								[A. thaliana]		Clp C1 WT
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

16055689(Glutathionylated suspension cell)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data