PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G64330.1   Phototropic-responsive NPH3 family protein

Lab Annot. Phototropic-responsive NPH3 protein
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64330.2 11Arabidopsis thaliana06471001001 (1)_
AT5G64330.3 11Arabidopsis thaliana058399990 (0)M
AT1G30440.1 11Arabidopsis thaliana3E-15072937540 (0)_
Os02g35970.1 7Oryza sativa079757680 (0)_
Os08g03650.1 7Oryza sativa9E-15067438560 (0)_
Os12g41910.1 7Oryza sativa7E-14266338560 (0)_
Zm00001eb244600_P002 agpv5Zea mays078959690 (0)_
GRMZM2G105400_P01 3.21Zea mays0789596922 (0)_
Zm00001eb244600_P001 agpv5Zea mays071960700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(1) DUF2353(1) NPH3(1)
TargetP: Cytoplasm (Class 2 C0.151; M0.095; S0.067; _0.926)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 746 aa (-cTP 662)
Molecular Weight 81.87 kDA(-cTP )
PI 7.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help