PPDB

The Plant Proteome Database

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AT5G64260.1   EXORDIUM like 2

Lab Annot. phosphate-responsive protein, putative
Mapman: 30.1.1 signalling.in sugar and nutrient physiology
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09440.1 11Arabidopsis thaliana7E-155306748143 (25)S
AT4G08950.1 11Arabidopsis thaliana2E-116298587250 (19)S
AT1G35140.1 11Arabidopsis thaliana8E-11330754714 (1)S
Os02g52040.1 7Oryza sativa5E-11028555692 (2)S
Os06g11650.1 7Oryza sativa6E-10928156710 (0)S
Os08g37840.1 7Oryza sativa2E-10629852680 (0)S
GRMZM2G008196_P01 3.21Zea mays1E-10428453671 (1)M
Zm00001eb279360_P001 agpv5Zea mays1E-10428453670 (0)M
v1_GRMZM2G008196_P01 4a53Zea mays1E-10428453671 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Phi_1(1)
TargetP: Secreted (Class 1 C0.005; M0.026; S0.966; _0.046)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 305 aa (-cTP 228)
Molecular Weight 32.67 kDA(-cTP )
PI 9.45(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1113Detail        [A. thaliana] control for RARE-1 co-IP wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2249Detail       seedlings [A. thaliana] total tissue gfs9
2300Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

16287169(Cell Wall proteome)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
19714877(interactomes 14-3-3 complexes (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
22430844(Golgi-cell-culture)
21433285(Crude microsomes cell_cultures)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


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