PPDB

The Plant Proteome Database

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AT5G64200.2   serine/arginine-rich splicing factor-like protein%2C putative

Lab Annot. ATSC35 (ARGININE/SERINE-RICH SPLICING FACTOR 35)
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
TAIR curated location: nuclear speck15133128
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64200.1 11Arabidopsis thaliana03031001003 (3)_
AT3G13570.1 11Arabidopsis thaliana5E-147741645 (4)C
AT5G18810.2 11Arabidopsis thaliana8E-147737680 (0)C
Os07g43050.2 7Oryza sativa9E-6529853620 (0)M
Os07g43050.3 7Oryza sativa9E-6529853620 (0)M
Os07g43050.1 7Oryza sativa1E-6430252610 (0)M
Zm00001eb199160_P005 agpv5Zea mays2E-6111482880 (0)_
GRMZM2G016296_P05 3.21Zea mays2E-6111482883 (3)_
v1_GRMZM2G016296_P05 4a53Zea mays2E-6111482882 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM_2(1) RRM_1(1) RRM_5(1)
TargetP: Cytoplasm (Class 2 C0.076; M0.205; S0.104; _0.840)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 303 aa (-cTP 301)
Molecular Weight 35.17 kDA(-cTP )
PI 11.54(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
17432890(leaf total membranes)
18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
19714877(interactomes 14-3-3 complexes (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


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