PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G64180.1 tropomyosin

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G64180.2 11 Arabidopsis thaliana 3E-110 158 100 100 0 (0) _
Os12g31790.1 7 Oryza sativa 1E-46 138 68 89 4 (4) _
GRMZM2G009795_P01 3.21 Zea mays 1E-48 145 64 87 0 (0) C
Zm00001eb409430_P002 agpv5 Zea mays 1E-48 145 64 87 0 (0) C
v1_GRMZM2G009795_P01 4a53 Zea mays 1E-48 145 64 87 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_13(1) Alanine_zipper(1) Allexi_40kDa(1) Ax_dynein_light(2) BLOC1_2(2) CENP-F
TargetP:	Cytoplasm (Class 1 C0.052; M0.080; S0.061; _0.947)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	158 aa (-cTP 111)
Molecular Weight	17.80 kDA(-cTP )
PI	5.41(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data